LOCUS ABO48880.1 622 aa PRT BCT 28-JAN-2014
DEFINITION Desulforamulus reducens MI-1 PTS system D-glucosamine-
specific IIB component, Glc family / PTS system D-glucosamine-
specific IIC component, Glc family / PTS system D-glucosamine-
specific IIA component, Glc family protein.
ACCESSION CP000612-328
PROTEIN_ID ABO48880.1
SOURCE Desulforamulus reducens MI-1
ORGANISM Desulforamulus reducens MI-1
Bacteria; Firmicutes; Clostridia; Eubacteriales; Peptococcaceae;
Desulforamulus.
REFERENCE 1 (bases 1 to 3608104)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J.,
Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E., Tebo,B.M. and
Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Desulfotomaculum reducens MI-1
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3608104)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Sims,D., Brettin,T., Bruce,D., Han,C., Tapia,R., Schmutz,J.,
Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E. and
Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2007) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000266
Source DNA and bacteria available from Bradley M. Tebo
(tebo@ebs.ogi.edu)
Contacts: Bradley M. Tebo (tebo@ebs.ogi.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LANL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. It is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Desulforamulus reducens MI-1"
/mol_type="genomic DNA"
/strain="MI-1"
/type_material="type strain of Desulfotomaculum reducens"
/db_xref="taxon:349161"
protein /locus_tag="Dred_0332"
/note="TIGRFAM: PTS system, glucose subfamily, IIA
subunit; PTS system, glucose-like IIB subunint; PFAM:
sugar-specific permease, EIIA 1 domain; phosphotransferase
system PTS, EIIB protein; phosphotransferase system, EIIC;
KEGG: cno:NT01CX_0332 PTS enzyme II, ABC component; TC
4.A.1.1.6; TC 4.A.1.1.6; TC 4.A.1.1.6"
/transl_table=11
/db_xref="InterPro:IPR001127"
/db_xref="InterPro:IPR001996"
/db_xref="InterPro:IPR003352"
/db_xref="InterPro:IPR011535"
/db_xref="InterPro:IPR013013"
BEGIN
1 MKKAFKYLQM VGQSLMLPVS VLPAAGLLLR FGEKDLLNMP AMKEAGLAIF ANLPLIFAVG
61 VAIGFSGGQS VAALAAVVGQ LILLAVLKAV DPSINMGVFS GIIMGITAAL LYKRFYQIKL
121 PQYLGFFAGK RFVPIITAVA GVVIALISAV VWPSIQNVID AVGQVAVSSS FGPALFAAGK
181 RLLIPVGLHH VYYPSFLYEF GQYVTAAGEI VKGDFNRYFA GDPTAGTFMA SEFPIMMFGL
241 PAAAFAIYRN ARPERKKAIA GLMASAAFTS FLTGITEPIE FSFIFVAPVL FVFHVLMAGV
301 SGFVTNLLDI HLGFTFSASF IDYLLSYKYG HNQLLLWPVG LVVGGLYFVV FNTAIKMLNL
361 KTPGREDEIT AVENQGTGSD LAHKVLDALG GANNIEILDA CITRLRVTVK DPDMVKKDVF
421 KALGASGVME MGKNLQIIFG TQSDSLKEEI RSLMTNTVSA TAEGAKPLPE LNVSASKTMI
481 KAPASGKVIP LEQVPDETFK QKLLGNGVAI EPVEGTFIAP VAGTVVQVFP TNHALTIKTE
541 NGIEILLHVG INTVSLKGQG FKALVSEGQK VTVGQKLLEV DLKQIEKAGL STITPVIIIG
601 SEDMEITPAN EVTSGEDTIL QI
//