LOCUS ABF09517.1 735 aa PRT BCT 28-JAN-2014
DEFINITION Cupriavidus metallidurans CH34 putative outer membrane
biogenesis protein (yhjG-like) protein.
ACCESSION CP000352-2775
PROTEIN_ID ABF09517.1
SOURCE Cupriavidus metallidurans CH34
ORGANISM Cupriavidus metallidurans CH34
Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
Burkholderiaceae; Cupriavidus.
REFERENCE 1 (bases 1 to 3928089)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Martinez,M.,
Goltsman,E., Pitluck,S., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Kim,E., Mergeay,M., Benotmane,M.A.,
Vallaeys,T., Michaux,A., Monchy,S., Dunn,J., McCorkle,S.,
Taghavi,S., van der Lelie,D. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of the chromosome of Ralstonia metallidurans CH34
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3928089)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Martinez,M.,
Goltsman,E., Pitluck,S., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Kim,E., Mergeay,M., Benotmane,M.A.,
Vallaeys,T., Michaux,A., Monchy,S., Dunn,J., McCorkle,S.,
Taghavi,S., van der Lelie,D. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (18-APR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
REFERENCE 3 (bases 1 to 3928089)
AUTHORS Janssen,P.J., Van Houdt,R., Moors,H., Monsieurs,P., Morin,N.,
Benotmane,R., Lapidus,A., McCorkle,S., Monchy,S., Taghavi,S., van
der Lelie,N., Dunn,J., Leys,N. and Mergeay,M.
TITLE Direct Submission
JOURNAL Submitted (03-FEB-2010) Instute of Environment, Health and Safety,
SCK-CEN, Boeretang 200, Mol 2400, Belgium
REMARK Sequence update by submitter
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 2351356
Source DNA and bacteria available from John J. Dunn (jdunn@bnl.gov)
Contacts: John J. Dunn (jdunn@bnl.gov)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-PGF
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Cupriavidus metallidurans CH34"
/mol_type="genomic DNA"
/strain="CH34"
/type_material="type strain of Cupriavidus metallidurans"
/db_xref="taxon:266264"
protein /locus_tag="Rmet_2640"
/transl_table=11
BEGIN
1 MPASHRRRKI ALWSLFTPLA LIALVVVVVL TFDWNRIKPW LNDKVTQAIG RPFAINGDLT
61 VTWRRAEGEA GWRALVPWPR LSAKDITVGN PDWAKQPSLA TIRELIFILR PAPLLTHEIS
121 VPTIVVDSPA VWLERLADRR NNWTFDTGPE TGESPWHLDV GEIVLERGNL SLNDGAEKIE
181 LQATLDTIGD QPLYDQERDG ALAPSADASA ASAPAGASNK TESKPESRYG IRWKVVGHYN
241 QATINATGKA GTALSLRDTR KPFPLQADVR VGGTRARIEG TLTNPAELGA LDVSLVLSGD
301 NMARLYALTG VVLPSTPPYE TRGRLVATLK KGASSYTYRN FTGKVGSSDL GGTLTFAQRA
361 PRPLLSGELV SKQLLFTDLA PIIGAEAKPG QAAAESTVKQ PANKVLPVAP FHTERWDAID
421 ADVTFTGERI VRDETLPITK LTTHVKLTDG VLRLDPLNFG LAGGNLVSTI QLDGKREPMA
481 AMVDMHARHL QIRQLFPKIE SMHASVGEVN GGARLTATGN SVAALLGSAN GEARLLVENG
541 TVSKFILEAI GLNVGSVVIS KLFGDKPVQI NCGVSAFGIT NGVAQAQTFV LDTQDAVITT
601 EGAIDFKDEE LALTIHPDSK GLRILSLRSP LYVGGTFKKP SVSPNYAILA LRAGSALALA
661 FTAPVALVVP LLDISPAEDS QCGKLLANLK KRPVIATPPG KPGPKNRQPA STPSVPAAPH
721 NLSRPTNDAQ LFQGG
//