LOCUS ABF08834.1 1150 aa PRT BCT 28-JAN-2014 DEFINITION Cupriavidus metallidurans CH34 transcription-repair coupling factor protein. ACCESSION CP000352-2043 PROTEIN_ID ABF08834.1 SOURCE Cupriavidus metallidurans CH34 ORGANISM Cupriavidus metallidurans CH34 Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus. REFERENCE 1 (bases 1 to 3928089) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Martinez,M., Goltsman,E., Pitluck,S., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E., Mergeay,M., Benotmane,M.A., Vallaeys,T., Michaux,A., Monchy,S., Dunn,J., McCorkle,S., Taghavi,S., van der Lelie,D. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence of the chromosome of Ralstonia metallidurans CH34 JOURNAL Unpublished REFERENCE 2 (bases 1 to 3928089) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Martinez,M., Goltsman,E., Pitluck,S., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E., Mergeay,M., Benotmane,M.A., Vallaeys,T., Michaux,A., Monchy,S., Dunn,J., McCorkle,S., Taghavi,S., van der Lelie,D. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (18-APR-2006) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA REFERENCE 3 (bases 1 to 3928089) AUTHORS Janssen,P.J., Van Houdt,R., Moors,H., Monsieurs,P., Morin,N., Benotmane,R., Lapidus,A., McCorkle,S., Monchy,S., Taghavi,S., van der Lelie,N., Dunn,J., Leys,N. and Mergeay,M. TITLE Direct Submission JOURNAL Submitted (03-FEB-2010) Instute of Environment, Health and Safety, SCK-CEN, Boeretang 200, Mol 2400, Belgium REMARK Sequence update by submitter COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 2351356 Source DNA and bacteria available from John J. Dunn (jdunn@bnl.gov) Contacts: John J. Dunn (jdunn@bnl.gov) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). FEATURES Qualifiers source /organism="Cupriavidus metallidurans CH34" /mol_type="genomic DNA" /strain="CH34" /type_material="type strain of Cupriavidus metallidurans" /db_xref="taxon:266264" protein /gene="mfd" /locus_tag="Rmet_1955" /transl_table=11 BEGIN 1 MPDNHAAFPF ASFPLIKPGL RHAVNGLTGS ADALAVAAYA RQHRRSAPMV AVVCAHAVDA 61 QRLAEEIPWF APELRVRLLP DWETLPYDSF SPHQDLVSER LATLHDIQGG QCDVMLVPAS 121 TALYRLAPPA FLAAYTFFFK QGAKLDEAAL KAQFTLAGYE HVSAVMRPGE YSVRGGLIDL 181 YPMGSALPYR IDLFGDEIET IRAFDPDSQR SLYPVKEVRL LPGREFPLDE TARTAFRGRW 241 RELFEGDPTK SPIYKDIGNG VPSAGIEYYL PLFFEQSATL FDYLPEGTQL AFSGNVDEAI 301 RRFWADTTQR YNFMRHDRER PLLPPADLFL SEEQFFVGAK PLARLVLQRD AAPADAPAFA 361 GHLPDVSVNR RAEDPLVNLE SLLLNKATRV LMCADSAGRR ETLLQLFAES GLRPMIVDDF 421 AAFLAGDSHF SIAVAPLQTG FALPSAQMAF VTEAELYAGT ARRSGRRKQE QASTVDAMVR 481 DLAELKIGDP VVHSEHGIGR YQGLVTLDMG QGDEEFLHLD YDKGSKLYVP VHQLHVISRY 541 SGADPETAPL HSLGTGQWDK AKRRAAQQIR DTAAELLNLY ARRALREGFA FPLQPKDYEA 601 FAESFGFEET PDQAAAIAAV IADMTSGKPM DRLVCGDVGF GKTEVALRAA FVAVLGGKQV 661 AMLAPTTLLA EQHFQTLSDR FAEWPVRIVE LSRFKTKKEI DAAIKQINEG TVDIVIGTHK 721 LLSDEVKFQR LGLVIIDEEH RFGVRQKEAL KTLRAEVDVL TLTATPIPRT LGMALEGLRD 781 FSVIATAPQK RLAIKTFVRR EEDGVIREAI LRELKRGGQV YFLHNEVETI ENKRAKLAEL 841 VPEARIAVAH GQMHERELER VMRDFVSRRD NILLCTTIIE TGIDVPTANT ILIHRADKFG 901 LAQLHQLRGR VGRSHHQAYA YLLVHDVEGL TRQAQRRLEA IQQMEELGSG FYLAMHDLEI 961 RGAGEVLGDK QSGEIHEIGF QLYTDMLNAA VKSLKAGKEP DLMAPLAATT EINLGTPALL 1021 PNDYCADVHE RLSIYKRLAN CEAGERVDDI QEELIDRFGR LPSQAQALIE THRLRIAAAP 1081 LGVRKIDAGE ATVSMQFVPN PPIDAIRIID LVQKNRHIKL AGQDKLRIEA KMPDVATRAQ 1141 TIKHTLRQLA //