LOCUS ABE40173.1 769 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 Malate dehydrogenase
(oxaloacetate decarboxylating) (NADP+)., Phosphate acetyltransferase
protein.
ACCESSION CP000283-2933
PROTEIN_ID ABE40173.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_2946"
/EC_number="1.1.1.40"
/EC_number="2.3.1.8"
/transl_table=11
/db_xref="InterPro:IPR002505"
/db_xref="InterPro:IPR012301"
/db_xref="InterPro:IPR012302"
BEGIN
1 MASNYEDLQA AALSYHRLPR PGKLEVHASK PLANQRDLAL AYSPGVAAAC NAIAADPGQA
61 ATLTVRGNLV AVVTNGTAVL GLGNIGPLAS KPVMEGKAVL FKKFADINVF DIEIAADTVE
121 RVVETVAALE PTFGGINLED IKGPECFEIE AQLKERMKIP VFHDDQHGTA IIVCAAVKNA
181 LLLKRKELSE VKIVTAGAGA AALACLNLLV SLGAERKNIW VCDLEGLVYE GRTVLMDRWK
241 AVYAQKTDKR TLAEVIGGAD VFLGLSGPKV LTPEMVMQMA EKPLVMALAN PTPEIMPDEV
301 RKVRPDALIC TGRSDLPNQV NNVLCFPYIF RGALDVGATA INEEMKVAAV DAIAQLARDP
361 PADPVAAGLD TDEVLGFGEG SLIPSPFDPR LILRIAPAVA MAAMDSGVAT RPITSFDDYY
421 AQLERFAFRS GLVMKPLFAK AKAQPVRVIY AEGEDERVLH AVQVILEEKL ARPILVGRPS
481 VVEARIKRSG LSIRPGEDFD LVNPQDDPRY RSYVQSYIDI AGRAGVTPAA ARTVVRTNST
541 VIAALAVARG EADAMICGLD GRYMNHLRHV RDVIGSLPGV SDYAALALLI TGRGAIFIAD
601 TQVRPNPTAE ELAEVAALAA VHVQRFNIKP RIAFLSHSDF GSYPTESSMK MRRATALLAE
661 RHPEIEADGE MQGDTALSQT ARELILPHSR LEGGANILIM PNLDTANVAY QMIKVVGEAL
721 PVGPILIGPA RPAHILTPSV TSRGILNMTA VAVVEAQERA GRHQRTLFG
//