LOCUS ABE39714.1 684 aa PRT BCT 28-JAN-2014 DEFINITION Rhodopseudomonas palustris BisB5 DNA topoisomerase IV subunit B protein. ACCESSION CP000283-2474 PROTEIN_ID ABE39714.1 SOURCE Rhodopseudomonas palustris BisB5 ORGANISM Rhodopseudomonas palustris BisB5 Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales; Nitrobacteraceae; Rhodopseudomonas. REFERENCE 1 (bases 1 to 4892717) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A., Oda,Y., Harwood,C.S. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence of Rhodopseudomonas palustris BisB5 JOURNAL Unpublished REFERENCE 2 (bases 1 to 4892717) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A., Oda,Y., Harwood,C.S. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4000372 Source DNA and bacteria available from Caroline S. Harwood (csh5@u.washington.edu) Contacts: Caroline S. Harwood (csh5@u.washington.edu) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). FEATURES Qualifiers source /organism="Rhodopseudomonas palustris BisB5" /mol_type="genomic DNA" /strain="BisB5" /db_xref="taxon:316057" protein /locus_tag="RPD_2484" /EC_number="5.99.1.3" /transl_table=11 /db_xref="InterPro:IPR000565" /db_xref="InterPro:IPR001241" /db_xref="InterPro:IPR002288" /db_xref="InterPro:IPR003594" /db_xref="InterPro:IPR005737" /db_xref="InterPro:IPR006171" /db_xref="InterPro:IPR011558" BEGIN 1 MAKALKPSSK SKSAGDLFGA APKSAAPRPA AKPTGGAEAG YTAADIEVLE GLEPVRRRPG 61 MYIGGTDEKA LHHLFAEVID NSMDEALAGH ATFIEVELTT DGFLTVSDNG RGIPVDPHPK 121 FPKKSALEVI MCTLHAGGKF DSKVYETSGG LHGVGVSVVN ALSSLLEVEV ARGQQLYRMV 181 FARGIPQGKL ESLGKINNRR GTRVRFKPDA DIFGAKAAFK PQRLFKMARS KAYLFGGVEI 241 RWKCDPELLK GLEDVPAEDT FHFPGGLKDY LGAAIHADTL VHPDIFSGKS GRNGAHGACE 301 WAVAWTADAD GFLSSYCNTV PTPDGGTHES GMRSALLRGL KDHAERVGQG KRASSITSED 361 VMVGAAVMLS VFVREPEFQG QTKDRLATAE AQRIVEQAIK DPFDHWLSGN PVQANKLLDF 421 VVERAEERLR RRQEKEISRK TAVKKLRLPG KLADCTNTAA EGSELFIVEG DSAGGSAKQA 481 RDRKTQAVLP LRGKILNVAS ATKDKVVANA QLSDLMQAIG CGTGVNYREE DLRYARIIIM 541 TDADVDGAHI ASLLITFFYR QMPKLIDEGH LYLAVPPLYR LTHGAKTVYA RDDAHKAELL 601 KKEFNANAKV DVGRFKGLGE MMPAQLKETT MDPAKRTLLR VVLLPDDREG TADSVERLMG 661 TKAEARFAFI SDKAEFASED LLDV //