LOCUS ABE38799.1 769 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 RTX toxins and related
Ca2+-binding proteins-like protein.
ACCESSION CP000283-1559
PROTEIN_ID ABE38799.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_1562"
/transl_table=11
/db_xref="InterPro:IPR001343"
BEGIN
1 MITAKPIRQS ESKTPTREDY VSEESDKRRW VPLAFLLFLT GCAAYLKSFM PVGLEAREEG
61 KPKPPGGDDE AAGPKPDEAI ATEDDDLTTA SIRPQPKSSD NVIPVRFALS KDGAVVMTSA
121 PPLSSNDQPP PVTIDRSTFG DRPGAPNDNR AGNPGGGGGG GGGGGGGGGG GSGDRGSGND
181 GPLRPPPERP PSVNPPTSEN QRNRAPRVTG PVYLSNVVGC EGMTIAVLAL LAGATDPDGD
241 ALRVLGVKSS SGTLKQADDG SWVFARDQGM LGEVTLTYWI TDGNLLIKQT AHFNVVEPPP
301 IIGGAGDDNL LGTRCADTII GNAGDDNIDG REGSDTISGG EGHDHIVAGS GNDIVYAGAG
361 NDIVFAGPGN DVVFGGAGND RLFGEDGDDI LFGEDGNDTL FGGAGADILI GDVGDDRLYG
421 DAGNDTLDGG DGDDELDGGD GNDRMAGGDG DDTLAGAAGN DTLIDGLGAD IVRGGTGNDY
481 VVAAADGAPD DYSGDAGRDT LDYSAANTRI AVDLERGTAD GDEIGHDTIA GFEEIIGGSG
541 DDDLSAGADA VTIRGGSGDD LVSDGAGEDV VDAGAGDDRV LAAMDGADDR YDGGADCDTM
601 DYSRATLRVN IDLGEETAEG IEIGKDLLAN FERIIGGSGD DDFIAGSSSV SFTGGEGNDT
661 FQFQRRDDDH QPDIVRKITD FSVGDRIIAA TYEIYYRDED AAADQVADLF EDIYLADQGD
721 QRPVRFRFEK QDNDEFTIIE VQDRPDNDQD FYAIQLSGHH QLQFTVSVS
//