LOCUS ABE38432.1 1154 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 condensin subunit Smc protein.
ACCESSION CP000283-1192
PROTEIN_ID ABE38432.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_1194"
/transl_table=11
/db_xref="InterPro:IPR001687"
/db_xref="InterPro:IPR003395"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR010935"
/db_xref="InterPro:IPR011890"
BEGIN
1 MKLTRLRLHG FKSFVEPTDF MIEPGLTGVV GPNGCGKSNL VEALRWAMGE TSHKSLRAAD
61 MDAVIFAGSG NRPSRNHAEV VMSIDNSDRT APAAMNDSEI LEISRRIERE AGSQYRINGR
121 EVRARDVQLL FADAATGARS PALVHQGKIG EIIQAKPEQR RRVLEDAAGV AGLHARRHEA
181 ELRLKAAETN LTRVEDVIGQ LSTQVDGLKK QARQAIRFRD VAAKVRKTEA MLYHLRWRDA
241 QSEVGAAAQV HDLGVRELAE RTREQAEAAR IQADRASELP GLREAEARAA AGLQRLINAR
301 ELLDREEARA KERVAELERR LTQFSADVER EQRQSIDADA ALERLETEDI ELREEIMERV
361 EKRSGVDERV GLAEEALGEA ERLFAELTTQ LAQLTARRNQ FEQAVRSHRD RLARLDNDIR
421 NVEAEVDKLT RETSGAGDVD ELAEAVAMAQ ETLAELESSV QNAEAAHISA RQKLDGSRAP
481 LTEADKRVQR LETEAKTISK ILNGETKNLW PPIIDGITVA KGYEKAIGAV LGDDLDAPVD
541 PSAPMRWTDV GVQADDPALP EGVEALSQHV NAPPELKRRL AQIGVVAKER GAELVGQLKT
601 GQRLVSLDGD VWRWDGFVAS AHAPTGAARR LAERARLVDI ENDLEQARID AAAKREALEM
661 AEAELRNAAA AETAARESLR GARREVDAAR ERHAAAEREI NRHAARRSAL TEAQSRLAAD
721 RLEAEMAYET AENALAELAP NDDSEQRLAA VRNDIENHRR NAAQVRAEAQ ALAREAELAD
781 KRLQAIVAER HEWNKRKQSA ASQIATVEER LAELTAERAE LDNAPAVFAE KRSAVITEIE
841 YAETDRRAAA DALATAEQAM ADTDRSAKAT LEHLSSAREA CARAEERMEA ARRRLEDVER
901 EIRDMLEVEP QAAASLAEVQ EGVELPALTE IEDNLEKLRR DRERLGAVNL RAEEELNEVE
961 TQHGSLAAER DDLVEAIKKL RTGIQSLNKE ARERLLASFE VVNGHFKRLF TTLFGGGEAE
1021 LKLIESDDPL EAGLEIIAKP PGKKPQSLSL LSGGEQALTA MALIFAVFLT NPSPICVLDE
1081 VDAPLDDHNV ERFCDLLNEM TATTETRFII ITHNPITMAR MNRLFGVTMA ERGVSQLVSV
1141 DLEGAVGILD QNVA
//