LOCUS ABE38155.1 542 aa PRT BCT 28-JAN-2014 DEFINITION Rhodopseudomonas palustris BisB5 alpha amylase, catalytic region protein. ACCESSION CP000283-915 PROTEIN_ID ABE38155.1 SOURCE Rhodopseudomonas palustris BisB5 ORGANISM Rhodopseudomonas palustris BisB5 Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales; Nitrobacteraceae; Rhodopseudomonas. REFERENCE 1 (bases 1 to 4892717) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A., Oda,Y., Harwood,C.S. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence of Rhodopseudomonas palustris BisB5 JOURNAL Unpublished REFERENCE 2 (bases 1 to 4892717) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A., Oda,Y., Harwood,C.S. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4000372 Source DNA and bacteria available from Caroline S. Harwood (csh5@u.washington.edu) Contacts: Caroline S. Harwood (csh5@u.washington.edu) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). FEATURES Qualifiers source /organism="Rhodopseudomonas palustris BisB5" /mol_type="genomic DNA" /strain="BisB5" /db_xref="taxon:316057" protein /locus_tag="RPD_0917" /transl_table=11 /db_xref="InterPro:IPR006047" /db_xref="InterPro:IPR006589" BEGIN 1 MDNVVSPSWW AAGVLYQIYP RSFQDSDADG IGDLRGIIDR LDYLSDLGVD AIWLSPIFPS 61 PMADFGYDVA DYVGIDPIFG SMADFDALMI TAHARGLKVI LDLVPNHSSD QHPWFVESRA 121 SRDNPKRDWY LWRDPAPGGG PPTNWLSEFG GSAWDYDEAT GQYYYHAFLA QQPDLNWRNP 181 QVRAAIYDAM RFWLRKGVDG FRVDVIWHLI KDDMFRDNPP NPEFSPDMPP HAALLPVYSV 241 DRPETLEIVA EMRAVLDEFD QRLLIGEIYL PIERLVAYYG ADTQGRLQGA QLPFNFALLS 301 TPWRAPAIAA LIARYEAALP EGAWPNWVLG NHDRPRVASR VGEAQARVAA MLLLTLRGTP 361 TLYYGDELGM TQVAIAPQDV RDPFEKNVPG IGVGRDGCRT PMQWDASANA GFSDARPWLP 421 LAPDAAPDNV ANLRADAQSI LNLYRALLRL RRRLPQLAQG AYQPLAAEGD LLLYRRHDQG 481 QSVLVALNLG ADPVSVGSDA FGLDGEVLLS TFMDRAGERI GATLDLRGDE GVIVGRAPEP 541 VV //