LOCUS ABE37597.1 426 aa PRT BCT 28-JAN-2014 DEFINITION Rhodopseudomonas palustris BisB5 ribosomal large subunit pseudouridine synthase D protein. ACCESSION CP000283-357 PROTEIN_ID ABE37597.1 SOURCE Rhodopseudomonas palustris BisB5 ORGANISM Rhodopseudomonas palustris BisB5 Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales; Nitrobacteraceae; Rhodopseudomonas. REFERENCE 1 (bases 1 to 4892717) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A., Oda,Y., Harwood,C.S. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence of Rhodopseudomonas palustris BisB5 JOURNAL Unpublished REFERENCE 2 (bases 1 to 4892717) AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S., Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A., Oda,Y., Harwood,C.S. and Richardson,P. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4000372 Source DNA and bacteria available from Caroline S. Harwood (csh5@u.washington.edu) Contacts: Caroline S. Harwood (csh5@u.washington.edu) Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LLNL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). FEATURES Qualifiers source /organism="Rhodopseudomonas palustris BisB5" /mol_type="genomic DNA" /strain="BisB5" /db_xref="taxon:316057" protein /locus_tag="RPD_0359" /EC_number="5.4.99.-" /transl_table=11 /db_xref="InterPro:IPR002942" /db_xref="InterPro:IPR006145" /db_xref="InterPro:IPR006224" /db_xref="InterPro:IPR006225" BEGIN 1 MVAGGGGGDD ARPLRQPQRG LGGDRNASLG AEKLIADGDE NRRERQRRGQ ARDHHHPPHP 61 RKQRGLFGGR FGQGGFGHAM LGFGSVFLEG SIVNDSSGHL LEVVVAGDEG SPRLDRVLAT 121 RCPALSRSRL KALILDGRVA IRGAPVRDPA YHAASGETIT IDVPPPVAPE PAGEAIALEI 181 VHEDDDIIVI DKPRGLVVHP AAGHETGTLV NALIAHCGES LSGIGGVRRP GIVHRLDKDT 241 TGLMVAAKND RAHQSLSAQF ADHGRTGELR RGYYAFVWGA PNRIRGTIDA PIDRHPHARE 301 KMAVRDGGRE AITHWEVLET FTGRSGGEIV SLIACQLETG RTHQIRVHLA HIGHPLLGDD 361 VYGPHFKTKA SQLRPDARAA LTDLGRQALH AYLLVLEHPS TGEVVAWESG LPADLKRLKA 421 ALTATE //