LOCUS       ABD99719.1               372 aa    PRT              BCT 31-JAN-2014
DEFINITION  Ligilactobacillus salivarius UCC118 RNA polymerase sigma
            factor protein.
ACCESSION   CP000233-896
PROTEIN_ID  ABD99719.1
SOURCE      Ligilactobacillus salivarius UCC118
  ORGANISM  Ligilactobacillus salivarius UCC118
            Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae;
            Ligilactobacillus.
REFERENCE   1  (bases 1 to 1827111)
  AUTHORS   Claesson,M.J., Li,Y., Leahy,S., Canchaya,C., van Pijkeren,J.P.,
            Cerdeno-Tarraga,A.M., Parkhill,J., Flynn,S., O'Sullivan,G.C.,
            Collins,J.K., Higgins,D., Shanahan,F., Fitzgerald,G.F., van
            Sinderen,D. and O'Toole,P.W.
  TITLE     Multireplicon genome architecture of Lactobacillus salivarius
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 103 (17), 6718-6723 (2006)
   PUBMED   16617113
REFERENCE   2  (bases 1 to 1827111)
  AUTHORS   Claesson,M.J., Li,Y., Leahy,S., Canchaya,C., van Pijkeren,J.P.,
            Cerdeno-Tarraga,A.M., Parkhill,J., Flynn,S., O'Sullivan,G.C.,
            Collins,J.K., Higgins,D.G., Shanahan,F., Fitzgerald,G.F., van
            Sinderen,D. and O'Toole,P.W.
  CONSRTM   Alimentary Pharmabiotic Centre, University College Cork
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2005) Department of Microbiology, Alimentary
            Pharmabiotic Centre, University College Cork, College Road, Cork,
            Ireland
FEATURES             Qualifiers
     source          /organism="Ligilactobacillus salivarius UCC118"
                     /mol_type="genomic DNA"
                     /strain="UCC118"
                     /db_xref="taxon:362948"
                     /focus
     source          /organism="Lactobacillus phage Sal2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:364251"
     source          /organism="Lactobacillus phage Sal1"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:364252"
     source          /organism="Lactobacillus phage Sal4"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:364253"
     source          /organism="Lactobacillus phage Sal3"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:364254"
     protein         /gene="rpoD"
                     /locus_tag="LSL_0909"
                     /note="COG0568 [K] DNA-directed RNA polymerase, sigma
                     subunit (sigma70/sigma32)"
                     /transl_table=11
BEGIN
        1 MAKEILENNP AFTKTLRDLI REYKPQKQVN YKVLTDKLVT PFKLDADQMD QLIGSIEDRG
       61 ISVVDENGEP SAHSLKAAAK EAEKAENDKD VSAPSGVKIN DPVRMYLKEI GRVNLLTADE
      121 EVALALKIEE GDQEAKQRLA EANLRLVVSI AKRYVGRGMS FLDLIQEGNM GLMKAVEKFD
      181 YRKGFKFSTY ATWWIRQAIT RAIADQARTI RIPVHMVETI NKLIRIQRQM LQDLGREPMP
      241 EEIGAEMDMP TEKVREILKI AQEPVSLETP IGEEDDSHLG DFIEDQDATS PAEHAAYELL
      301 KEQLESVLDT LTDREENVLR LRFGLDDGRT RTLEEVGKVF GVTRERIRQI EAKALRKLRH
      361 PSRSKQLKDF LE
//