LOCUS ABD99013.1 1221 aa PRT BCT 31-JAN-2014 DEFINITION Ligilactobacillus salivarius UCC118 DNA-directed RNA polymerase beta' chain protein. ACCESSION CP000233-190 PROTEIN_ID ABD99013.1 SOURCE Ligilactobacillus salivarius UCC118 ORGANISM Ligilactobacillus salivarius UCC118 Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Ligilactobacillus. REFERENCE 1 (bases 1 to 1827111) AUTHORS Claesson,M.J., Li,Y., Leahy,S., Canchaya,C., van Pijkeren,J.P., Cerdeno-Tarraga,A.M., Parkhill,J., Flynn,S., O'Sullivan,G.C., Collins,J.K., Higgins,D., Shanahan,F., Fitzgerald,G.F., van Sinderen,D. and O'Toole,P.W. TITLE Multireplicon genome architecture of Lactobacillus salivarius JOURNAL Proc. Natl. Acad. Sci. U.S.A. 103 (17), 6718-6723 (2006) PUBMED 16617113 REFERENCE 2 (bases 1 to 1827111) AUTHORS Claesson,M.J., Li,Y., Leahy,S., Canchaya,C., van Pijkeren,J.P., Cerdeno-Tarraga,A.M., Parkhill,J., Flynn,S., O'Sullivan,G.C., Collins,J.K., Higgins,D.G., Shanahan,F., Fitzgerald,G.F., van Sinderen,D. and O'Toole,P.W. CONSRTM Alimentary Pharmabiotic Centre, University College Cork TITLE Direct Submission JOURNAL Submitted (16-DEC-2005) Department of Microbiology, Alimentary Pharmabiotic Centre, University College Cork, College Road, Cork, Ireland FEATURES Qualifiers source /organism="Ligilactobacillus salivarius UCC118" /mol_type="genomic DNA" /strain="UCC118" /db_xref="taxon:362948" /focus source /organism="Lactobacillus phage Sal2" /mol_type="genomic DNA" /db_xref="taxon:364251" source /organism="Lactobacillus phage Sal1" /mol_type="genomic DNA" /db_xref="taxon:364252" source /organism="Lactobacillus phage Sal4" /mol_type="genomic DNA" /db_xref="taxon:364253" source /organism="Lactobacillus phage Sal3" /mol_type="genomic DNA" /db_xref="taxon:364254" protein /gene="rpoC" /locus_tag="LSL_0198" /EC_number="2.7.7.6" /note="COG0086 [K] DNA-directed RNA polymerase, beta' subunit/160 kD subunit" /transl_table=11 BEGIN 1 MIDVNKFDSM QIGLASSDKI RSWSYGEVKK PETINYRTLK PEKDGLFDER IFGPTKDWEC 61 ACGKYKRIRY KGVVCDRCGV EVTRSKVRRE RMGHIELAAP VTHIWYFKGI PSRMGLVLDM 121 SPRALEEIIY FASYVVTDAG DTALEKKQLL TEGEYREKRE EYGDGFKAAM GAEAIRTLLR 181 DVDLEKECAE LKEELREATG QKRTRAVRRL DILEAFLNSG NRPDWMVMDA IPVIPPDLRP 241 MVQLEGGRFA TSDLNDLYRR VINRNNRLKR LLDLNAPGII VQNEKRMLQE AVDALIDNGR 301 RGRPVTGPGN RPLKSLSHML KGKQGRFRQN LLGKRVDYSG RSVIDVGPKL KLNQMGIPHE 361 MALELFKPFM MRELVKREMA SNIKNAKRKI ERRDEDIWDV LDDVIKEHPV LLNRAPTLHR 421 LGIQAFEPVL VNGKAMRLHP LACEAYNADF DGDQMAIHVP LSDEAQAEAR LLMLAAHHIL 481 APKDGKPIIS PSQDMTIGNY YITLEEAGRE GEGMVFKDVN EVRTAYQNGY VHLHTRIGLQ 541 ASSLAKLGTP FTDWQKERIL ITTAGKAIFN EILPADFPFL NEPTQENLTG MTPDKYFVEP 601 GTDIKEFIKN QPLVGPFKSG FLSDIIAQVY KEYKVTATAE LLDRMKDLGY YESTKSGLTV 661 GIADVTVLKE KPEIIEQAHK NVATVAKQFR RGLITDEERY NRVISIWNKA KDDIQAKLVE 721 NMDPSNPIQM MSDSGARGNI SNFTQLSGMR GLMAAPNGKT MELPVISNFR EGLSVLEMFL 781 SSHGARKGMT DTALKTANSG YLTRRLVDVA QDVIIREEDC HTDRGLDVTA ITEGNEMIEP 841 LYDRILGRYT MKEVKDPNTG EIIVPANVLV EESEARKIVD AGVQKVTIRS AFTCNTRHGV 901 CERCYGRNLA TGDEVEVGEA VGTVAAQSIG EPGTQLTMRN FHQGGVAGGD DITQGLPRVQ 961 ELFEARNPKG RAVITEVTGV VDTVEENPAE RTKEVTVKGE TDTRTYSLPF TSVLKVKEGD 1021 QVHRGDALTV GSIDPKELIK VRDVLSTENY ILREVQKVYR MQGVDISDKH IEIMTRQMLR 1081 KVRIMDPGDT DMLPGTLLDI SQFKDRNTSA IIEGRIPATA RPVLLGITKA ALETNSFLSA 1141 ASFQETTRVL TDAAIRGKND PLVGLKENVI IGKTIPAGTG MKKYHDIEPE VVNSNVTDGV 1201 YSISELEEKI NEQQNNVESS N //