LOCUS       ABD99012.1              1199 aa    PRT              BCT 31-JAN-2014
DEFINITION  Ligilactobacillus salivarius UCC118 DNA-directed RNA polymerase
            beta chain protein.
ACCESSION   CP000233-189
PROTEIN_ID  ABD99012.1
SOURCE      Ligilactobacillus salivarius UCC118
  ORGANISM  Ligilactobacillus salivarius UCC118
            Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae;
            Ligilactobacillus.
REFERENCE   1  (bases 1 to 1827111)
  AUTHORS   Claesson,M.J., Li,Y., Leahy,S., Canchaya,C., van Pijkeren,J.P.,
            Cerdeno-Tarraga,A.M., Parkhill,J., Flynn,S., O'Sullivan,G.C.,
            Collins,J.K., Higgins,D., Shanahan,F., Fitzgerald,G.F., van
            Sinderen,D. and O'Toole,P.W.
  TITLE     Multireplicon genome architecture of Lactobacillus salivarius
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 103 (17), 6718-6723 (2006)
   PUBMED   16617113
REFERENCE   2  (bases 1 to 1827111)
  AUTHORS   Claesson,M.J., Li,Y., Leahy,S., Canchaya,C., van Pijkeren,J.P.,
            Cerdeno-Tarraga,A.M., Parkhill,J., Flynn,S., O'Sullivan,G.C.,
            Collins,J.K., Higgins,D.G., Shanahan,F., Fitzgerald,G.F., van
            Sinderen,D. and O'Toole,P.W.
  CONSRTM   Alimentary Pharmabiotic Centre, University College Cork
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2005) Department of Microbiology, Alimentary
            Pharmabiotic Centre, University College Cork, College Road, Cork,
            Ireland
FEATURES             Qualifiers
     source          /organism="Ligilactobacillus salivarius UCC118"
                     /mol_type="genomic DNA"
                     /strain="UCC118"
                     /db_xref="taxon:362948"
                     /focus
     source          /organism="Lactobacillus phage Sal2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:364251"
     source          /organism="Lactobacillus phage Sal1"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:364252"
     source          /organism="Lactobacillus phage Sal4"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:364253"
     source          /organism="Lactobacillus phage Sal3"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:364254"
     protein         /gene="rpoB"
                     /locus_tag="LSL_0197"
                     /EC_number="2.7.7.6"
                     /note="COG0085 [K] DNA-directed RNA polymerase, beta
                     subunit/140 kD subunit"
                     /transl_table=11
BEGIN
        1 MNNLAGHLVK YGKHRVRRSY SRIKEVLDLP NLIEVQTDSY KWFLDEGLRE MFDDIMPIED
       61 FQGKLSLEFV DYQLLEPKYT VEEARQHDAN YSAPLHVTLR LINHETGEIK SQDVFFGDFP
      121 LMTKQGTFII NGAERVIVSQ LVRSPGVYFN SELDKNGRTN YGTTVIPNRG AWLEYETDAK
      181 NVAYVRIDRT RKIPLTELIR ALGYGSDNEI VEILGSNSDS LMLTLEKDVH KNMDDSRVEE
      241 SLKDIYERLR PGEPKTADSS RSLLTARFFD PKRYDLAPVG RYKINKKLDL KTRLLNLTVA
      301 ETLADPDTGE IIVNKDEVID KQVMDKLAPY LARDDFKTFT FHPSEEGVVQ EPMTLQIVKV
      361 YSPKDPEKVV NVIGNANVDI QFKHITPADI VASMNYFFNL QEGMGSTDDI DHLGNRRTRS
      421 VGELLQNQFR IGLSRMERVV RERMSIQDTS TVTPQQLINI RPVVASIKEF FGSSQLSQFM
      481 DQTNPLGELS HKRRFSALGP GGLTRDRAGY EVRDVHYTHY GRMCPIETPE GPNIGLINSL
      541 SSYARINKYG FVETPYRRVS WETHKVTDKI DYLTADEEDN YVIAQANSPL NDDGSFVDDV
      601 VMARKKDDDV EISTEKVDYM DVSPKQVVAV ATACIPFLEN DDSNRALMGA NMQRQAVPLI
      661 KPHAPLVGTG IEYKAAHDSG VALISEHEGT VEYVDAREIR VRRDDGSLDK YKLMKFHRSN
      721 GGKNYNQTPI VRVGDRVDAD EVLADGPAME NGELALGQNP LIAFMTWDGY NFEDAIAINE
      781 RLVKEDVYTS IHIEEHESEA RDTKLGPEEI TREIPNVGED ALKNLDEFGI IRIGAEVKDG
      841 DILVGKVTPK GVTELSAEER LLHAIFGEKA REVRDTSLRV PHGAGGIVQD VKIFTREGGD
      901 ELSPGVNMMV RVYIAQKRKL QVGDKMAGRH GNKGTVSVVI PEEDMPFMPD GTPIDIMLSP
      961 MGVPSRMNIG QVLDLHLGMA ARKLGIHVAS PVFDGARDED IWSALQEAGL PGDGKTVLYD
     1021 GRTGEAFDNR IAVGVMYYLK LAHMVDDKIH ARSIGPYSLV TQQPLGGKAQ FGGQRFGEME
     1081 VWALEAYGAA YTLQEILTYK SDDVVGRVKT YEAIVKGEPI PKPGVPESFR VLVKELQALG
     1141 MDMKVLDADK NEIELRDMDD EDDDIVNVDA LKKFAKEQEE KKAKEAEQET AEKEETKTE
//