LOCUS ABA59420.1 1594 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 glutamate dehydrogenase
(NAD) protein.
ACCESSION CP000127-2866
PROTEIN_ID ABA59420.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_2978"
/EC_number="1.4.1.2"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
/db_xref="InterPro:IPR007780"
BEGIN
1 MKIFVEVRES RATYSDHEKK INEIHSFLEQ QSKIHGKRFL KALATILITP DSFLLSIPTY
61 HLASLITDFF DLIEARGKKI AAHCFPFPEK TGTLLLISSP YASYLVESLG ASKEAQDIDF
121 HLMAYHALMI KRRDRKIIDL GTADKSGPKE SLILLKLEDI NEKKFQDFAA TIQKIVSKTL
181 QVQSDKENIA AQVRQLEQAP SLQAWKSFLI WCQQGAFIPF SYHCFIVNSQ SGKKIVIQEQ
241 NDKRLGLPFD SLLESTKEEN VSSLLTILNP EEIQRELPVL VQKTRIKSPL YHSEYLTYMG
301 IREPLEKGQI KEHALIGLFS EKAFAGDTMN ISALRDKAEQ SLKQLRLLTV DHEYNKLIEL
361 LHFFPKVELF FMGEVQLQII ARSLLPFLYR SDTVKLLILA SPSPTRISTL ILIPQGFFDE
421 SHLRDMEIYL CQELAAILEN SQLIRGIHSH YIGLHLTLIP QKEEVLIPLE QLENTLTRIA
481 KPWNYKLQVL LEQAMGKEQG EVLWNKYGKG FLPEYQVLTP PQAALQDIKG LERVLETGQQ
541 FIDLWESPYE LSKEHYRLQF YSSQESLLDE LMPVLKNLGL RVIDQVRFTL EVENRGFFIK
601 SFSIKAAKET AKPLSSLRVP LLDALGALFR GEVDDDPLNE LLVLTGLSWK EIDIFRSYRN
661 YYFQLGTHFT LSRFHQSLSH NPQVALLLCR YFEARFRPDP QWDDPVRREE EGLLPIRLEL
721 ATALKSVTDV NEDRILRTLF NLIDATVRTN FYYRHKQRDY FLSFKISSLG VIDMPPPRPL
781 YEIYIHSATV EGIHLRGGRV ARGGLRWSDR PDDFRTEILG LMRTQMMKNS LIVPVGAKGG
841 FIVKRSFSSR EEGAKLAKQA YITFIQSLLD LTDNREGSQV VRPPKVVAYD EDDPYLVVAA
901 DKGTAHLPDT ANEVAQEYHF WLDSAFASGG AFGYHHKKLG ITARGAWECV KRHFRELDLD
961 IQTQPFTAIG IGSMDGDVFG NGMLLSRQIR LLAAFGPGHI FIDPEPDPEV SYRERKRLFK
1021 LPGSSWNDYD DTLISEGGGI FPRRAKDIPL SPQVRYLLKT RHLSMDGEGL IRLLLTTPVD
1081 LLWFGGIGTY VKASTEKHIE VGDRTNDTVR VDASQLQARV VGEGANLGFT QRGRIEYALG
1141 GGRINTDAID NSGGVDLSDH EVNLKIFFNH LRERKIISSE EEQNHWLEKV KEEVCQQVLA
1201 NNYSQSLCLS LDRERYLRDT EPFMELADRL ENSGLLDRLS DTFPYRKEVL ARHGEGLTRP
1261 ELAVLVSYSK TQLYQILLEQ PDILSEPFLQ EFAISYFPRA INEQFGNHIY DHPLGKEITA
1321 TILCNTIIDH TGCSFLTWVE ELKDIPIAHH PMVAYLVFNK ILEGNTLRTQ IYALDTIIPA
1381 SRQYSLLLQF EDTLANFCHW NLANNKQIIP NEKTLSSFHY YLEQYELYQE ETLTKSEDQP
1441 FKERVRKLIE EGFSAKISRR IALLDRLTDF PLLVELASTS GKEFSLVVSI YEAVSNYLGY
1501 SEVKEILHQV PVRNRWEHRA ITTFRERFEV YLSNLALAIL AAPDQGIANF FSTTTRQQRL
1561 LQYQRIREEL RETPPTDLLP FTVLSRKLET LIQG
//