LOCUS ABA59025.1 1073 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 carbamoyl-phosphate synthase
large subunit protein.
ACCESSION CP000127-2471
PROTEIN_ID ABA59025.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_2572"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
/db_xref="InterPro:IPR002695"
/db_xref="InterPro:IPR005479"
/db_xref="InterPro:IPR005480"
/db_xref="InterPro:IPR005481"
/db_xref="InterPro:IPR005483"
/db_xref="InterPro:IPR006275"
/db_xref="InterPro:IPR011607"
BEGIN
1 MPKRNDINSI VILGAGPIVI GQACEFDYSG AQACKSLKEE GYRVILVNSN PATIMTDPEL
61 ADATYIEPIT WKTVAKIIEK ERPDALLPTM GGQTALNCAL DLAREGILER YDVEMIGANQ
121 EAINKAEDRD LFRQAMQKIG LDMPRSAIAH SLEEAQQAQR DLGFPIVIRP SFTLGGSGGG
181 IAYNREEFVE ICERGLDLSP NSELLIDESV LGWKEFEMEV VRDSKDNCII ICTIENLDPM
241 GVHTGDSITV APAQTLTDKE YQVMRDAALA VLREIGVDTG GSNVQFAVDP ENGRLIIIEM
301 NPRVSRSSAL ASKATGFPIA KVAAKLAVGY TLDELQNEIT GGLTPASFEP SIDYVVTKIP
361 RFTFEKFPRA DARLTTQMKS VGEVMAIGRN FQESLQKALR SLETGTDGFN EKVDLAAEDV
421 VETLRYQLRV PSADRIYYLA DAFRAGFSMA EIYDLSHIDP WFLTQIQDLV EVEQGLRGTS
481 LEQVEKDRLY RLKRQGFSDR RLAVLLGAGE EEVRRRRHTL GIRPVYKRVD TCGAEFATTT
541 AYLYSTYDEE CEAVPSQRNK IMVLGGGPNR IGQGIEFDYC CVHAALALRE DGYETIMVNC
601 NPETVSTDYD TSDRLYFEPL TLEDVLEIIS LEQPQGVIVQ YGGQTPLKLA RALEAAGAPI
661 IGTSPDSIDL AEDRERFQWL IEKLGLKQPP NRTARTQEEA IRLAAEIGYP LVVRPSYVLG
721 GRAMEIVYNA DELARYMKEA VSVSNDSPVL LDRFLDEATE VDVDAICDGE QVMVGGIMEH
781 IEQAGVHSGD SACALPPFSL SAAVQNRLRE QVYNMARELK VVGLMNTQFA IQANEIYILE
841 VNPRASRTVP FVSKTIGIPL AKVAARCMMG QSLAKQGMIE EIIPHYFAVK EAVFPFIKFS
901 GVDPILGPEM KSTGEVMGTG RCFGEAFYKA LLGAGVVLPQ KGKVFISVRD ADKQRIVPVA
961 QELSRLGFEL LATRGTSTVL DQEGVACIQI NKVLEGQPHI VDMIKNDEIA LIINTTEGRK
1021 AVSDSYTIRR SALQHKVTYT TTVAGAWATC EALRAETTDS VYRLQDLQRE ARK
//