LOCUS ABA58580.1 845 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 bacterial translation
initiation factor 2 (bIF-2) protein.
ACCESSION CP000127-2026
PROTEIN_ID ABA58580.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_2120"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
/db_xref="InterPro:IPR000178"
/db_xref="InterPro:IPR000795"
/db_xref="InterPro:IPR002917"
/db_xref="InterPro:IPR004161"
/db_xref="InterPro:IPR005225"
/db_xref="InterPro:IPR006847"
BEGIN
1 MSEVTVRQLA DVVGTPVGRL LEQLREAGIG VDREDAAITE AQKLQLLRYL RHSHGASVEI
61 ATPKRITLNR RSHSEIQVNA GGGRSKTVNV EVRKKRTYIK RSAILEQERL AERQREEEEA
121 QAGVQAQQER EARLIAEEEA KRQAAEEEAK RQAAEEEAKR QAAEEEAKRQ AEAQVKRRLD
181 VEKKPKNGLE PARTEKPASR KAKPRFRSED RESEQKQRGT KFGRKELHIA PGKAGTSKRK
241 KFRPQKAAPA AKHGFERPTA PIVHDVSIPE TMTVAELAQK MSVKAAEVIK ALMKLGIMAT
301 INQVLDQDTA TIVVEEMGHK PKRLQENTLE LELVQAEQEV SRQVSRAAVV TIMGHVDHGK
361 TSLLDYIRRA KVATSEAGGI TQHIGAYKVR SDKGEITFID TPGHAAFTAM RARGAKVTDI
421 VILVVAADDG AMPQTVEAIQ HARAAGAPLV VAVNKIDRPD ADPDRVKQEL ANHDVITEEW
481 GGDTQFVNVS AKTGEGIDDL IEAILLQAEV MEIKVSAEGP ARGVVIESRL DKGRGPVATI
541 LVQSGTLRKG DILLSGVETG RVRAMLTERG QEIIEAGPST PVEILGLSGT PNAGDEAVVV
601 PDERRAREIA GHRQAKEREV KLARQQSAKL ENMFNEMEEG EIRALNLVIK ADVQGSAEAL
661 SDSLTKLSTD KARVKVVAAG VGGINETDVN LAVASNAVII GFNVRADAAA RRLIAEKGID
721 LHYYSVIYNA IDEIKGALIG ILDPEYREEI IGLARVDDVF RSPKLGAIAG CLVIEGSVRR
781 NNPIRVLRDN IVVFEGQLES LRRFKDDVQE VRAGTECGIG VKDYKDVKVG DQIEVYERVR
841 KEPAL
//