LOCUS ABA58230.1 700 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 response regulator receiver
modulated diguanylate cyclase/phosphodiesterase protein.
ACCESSION CP000127-1676
PROTEIN_ID ABA58230.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_1758"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
/db_xref="InterPro:IPR000014"
/db_xref="InterPro:IPR000160"
/db_xref="InterPro:IPR000700"
/db_xref="InterPro:IPR001633"
/db_xref="InterPro:IPR001789"
BEGIN
1 MKRHQHRGIN KMRGLRVLIV EDSEDDALLL ERHLRRGDYQ PFVKRVETRE TMLAALQTQP
61 WDIILSDHSL PHFGSMDALT LLQKESIDIP FIMVSGTVGE DRAVEIMKAG AHDYIMKDNL
121 RRLVPAVERE LREANIRRQR QAVENERARL SSILEATPDL VAIMDLEGRI HYMNQAGRQW
181 LGFIKKNHYA GASLLAHYPL WTASLIRDTA IPAALREGVW EGEAVILNPS GGEIPVSQVI
241 LSHRNALNQV EFLSTIARDI SERKHYEQEL QYRVTHDTLT HLPNRILLRD RLIQVLAHAK
301 RNQRLTAVLF LDVDNFKQIN DGLGHLTGDK CLRTLAHHLA GCIRESDTLG RYGGDEFLII
361 LSDLRSYSDV ETLIKKIRAT VSQPLKLNNN DVFITLSIGV SLYPQDGDDE EALLKTADAA
421 MHTAKHSSPG QCRYYRPEMN VRGSELLALE TDLHRALERE EFVLYYQPQL DVTTGQITAV
481 EALIRWQHPN RGLVSPRDFI PLLEQTGLIE EVGKWGLNTA CRQAKAWHSQ GYPIRMAVNC
541 SARQFQQHFL DIVHQILQKQ SLDPAYLELE VTESVVMQDT QSATYILQRL KEMGVTLAID
601 DFGTGYSSLA YLKRFPIHSL KIDCSFVRDV TKNEEDAAIA ETILLLGNSL GLEVVAEGVE
661 TEAQMRFFQD RHCHRIQGYW IGRPMPAKDL FPLITGRNNP
//