LOCUS ABA57707.1 1232 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 methionine synthase (B12-
dependent) protein.
ACCESSION CP000127-1151
PROTEIN_ID ABA57707.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_1206"
/EC_number="2.1.1.13"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
/db_xref="InterPro:IPR000489"
/db_xref="InterPro:IPR003726"
/db_xref="InterPro:IPR003759"
/db_xref="InterPro:IPR004223"
/db_xref="InterPro:IPR006158"
/db_xref="InterPro:IPR011822"
BEGIN
1 MSVKSPRITA LKEQLIKRIL ILDGALGTMI QSYGLTEAEF RGDRFADWSC DLKGNNDLLA
61 LTQPQILREI HGNYLAAGAD IIETNTFNAT RIAMADYRME ELAVEINQTA AQLAREMADD
121 MTAKTPDRPR FVAGVLGPTN RTASISPDVN DPGFRNTSFD ELVAAYTESI RGLIQGGTDI
181 LLVETIFDTL NAKAAVYAIE QYFEDHQIRF PVMISGTITD ASGRTLSGQT TEAFWNSLRH
241 AEPLAFGLNC ALGPKQLRQY VEELAGLADT HVAAHPNAGL PNEFGGYDET PEEMAQEIGE
301 WAQAGFLNIV GGCCGTTPEH IRAIREAVEK HPPRKIPQRP VACRLSGLEP SNIDADSLFV
361 NVGERTNITG SAKFRRLIKE EDYETALEVA RQQVESGAQI IDINMDEGLL DSQKAMVRFL
421 NLIAVEPDIS RVPVMIDSSK WEIIEAGLKC IQGKGIVNSI SLKEGEEPFL QQAKQVRRYG
481 AAAVIMAFDE QGQAETTERK VGICARAYQL LTEKIGFPAE DIIFDPNIFA VATGIEEHNN
541 YGVTYIEAAR EIKRTLPPAL VSGGVSNVSF SFRGNEKVRE AIHAVFLYHA IQAGMDMGIV
601 NAGQLAVYDE IDQDLRERVE DVILNRHPEA TERLLEIAEK YRGAGGEAAE RKEDLAWREL
661 PVNERLAHAL VKGIIDFVEA DTEEARLAAK RPLDVIEGPL MDGMNVVGDL FGSGKMFLPQ
721 VVKSARVMKK AVAYLLPFME NEKESYKSHG KVVLATVKGD VHDIGKNIVA VVLQCNSFEV
781 IDLGVMVPAE KILQTAKEES CDFVGLSGLI TPSLDEMVHV AKEMERQNFD LPLLIGGATT
841 SKMHTAVRIE PQYSQPVVYV PDASRVVGVA QRLLNPSLKA EYAAEITEEY GQMRRRRTEQ
901 QTERSHTPLP QARANKLKTD WTAYVPPRPT FLGLKSFADY PLEELTARID WTPFFHAWEL
961 AGKYPRILKD EVVGEEARKL LKDAQALLKQ VLEEKWLEAR AVIGFFPANT VNEDDIELYT
1021 DESRQEVLTT LHHIRQQMVR RSGQPNYCLA DYVAPKETGV ADYIGAFAVT AGLGIDERLE
1081 EFARQYDDYN SILLKAIADR LAEAFAECMH ERVRKEFWHY APDEALTNEE LISENYRGVR
1141 PAPGYPACPD HTEKATLWQL IEPDKNAGII LTESYAMVPT AAVSGWYFPH PESRYFGTGK
1201 IQKDQVKDYA RRKGISVEQV ERWLRSILGY EI
//