LOCUS ABA57218.1 1091 aa PRT BCT 28-JAN-2014
DEFINITION Nitrosococcus oceani ATCC 19707 ATP-dependent dsDNA exonuclease
(SbcC) protein.
ACCESSION CP000127-662
PROTEIN_ID ABA57218.1
SOURCE Nitrosococcus oceani ATCC 19707
ORGANISM Nitrosococcus oceani ATCC 19707
Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales;
Chromatiaceae; Nitrosococcus.
REFERENCE 1 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Nitrosococcus oceani ATCC 19707
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3481691)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Chain,P.,
Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F., Land,M.,
Hauser,L., Kyrpides,N., Ivanova,N. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (21-SEP-2005) US DOE Joint Genome Institute, 2400
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA available from Dan Arp (arpd@bcc.orst.edu)
Bacteria available from ATCC: ATCC 19707
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-LLNL
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Nitrosococcus oceani ATCC 19707"
/mol_type="genomic DNA"
/strain="ATCC 19707"
/culture_collection="ATCC:19707"
/type_material="type strain of Nitrosococcus oceani"
/db_xref="taxon:323261"
protein /locus_tag="Noc_0704"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
/db_xref="InterPro:IPR001687"
/db_xref="InterPro:IPR003439"
BEGIN
1 MRIRQVRFKN LNSLVGEWEI DLTHPAFVSD GIFAITGPTG AGKTTILDAI CMALYGRTPR
61 LNKVTKRGNE IMSRQTGECF AEVTFETQTG RYRCHWSQHR ARKKPDGELQ APRHEIANAD
121 SGEIFESKIR GVADQIESAT GMDFHRFTRS MLLAQGGFAV FLQAVQDERA PILEQITGTE
181 IYSQISIRVH ERQREEREKL NLLQAETEGI VMLEPEQEQE IGQTLEIKRK EEADLTAKFA
241 DTGQAMAWLT TIDGLKKEIV NLADEVRKLQ NDIEAFRPDR EKLNRALSAA SLDGAYATLT
301 AIRKQQVEDR EALKAEGEAL PGLESSAKEQ AESLKSAEQQ TARVKEELKV AAPTLQKVRS
361 LDQELANLKK TAAEDKQDCQ QDLEKIDTDK QARLEEQEKR STAHGNLELV DSYLKEHAQD
421 EWLISGLAGV EEQVSSLLSR QNEIHQKEID QDKAAKALEQ ATKSLDDCQK QSDLRKQALE
481 DSSKQLQQGK DALSQLLGNR LLREYRTEKE TLLREMAFLA KIAELEDHRA KLEDGKPCPL
541 CGATEHPFAA GNVPVADESE QKIDALTRLI SEVEDQETAI KEHEKAESLA HKDLTEAEKQ
601 ESAAANGRKV AEKALAEVTD SLEKLRADFA ERRQAVAAKL LPLGITDIPE TDISLLPEIL
661 RARLKAWQAQ VKKKADIEKQ ITDLDSEVKR LDAVIETQST ALAEKLKRLE SLKKELATVS
721 DERNALYGGK NPDDEERCLN KAVADAEGVE RWVREQHNEL QQQWKTGKAL VESLKKGIDQ
781 REPELSRLET EFFAALVSVD FSNEEQYLAA LLSSERRAEL VTTAKDLDDC QTDLKARQKD
841 RETHLATEMA KKVTDQSIEE LESQSKEYEN TLKELRDIIA SLKHKLSENM AAKERLKEKQ
901 GAIEAQKKEC RRWKNLHELI GSADGKKYRN FAQGLTFEVM VGHANRQLRK MTDRYLLVRD
961 EAQPLELNVV DNYQAGEIRS TKNLSGGESF IVSLSLALGL SHMASKNVRV DSLFLDEGFG
1021 TLDEEALDTA LEALAGLQQD GKLIGIISHV PALKERISSQ IQVTPQTGGR SKISGPGCGG
1081 LSAAKWAKEA G
//