LOCUS AAZ56500.1 1403 aa PRT BCT 24-JAN-2023
DEFINITION Thermobifida fusca YX conserved hypothetical protein protein.
ACCESSION CP000088-2460
PROTEIN_ID AAZ56500.1
SOURCE Thermobifida fusca YX
ORGANISM Thermobifida fusca YX
Bacteria; Actinomycetota; Streptosporangiales; Nocardiopsaceae;
Thermobifida.
REFERENCE 1 (bases 1 to 3642249)
AUTHORS Lykidis,A., Mavromatis,K., Ivanova,N., Anderson,I., Land,M.,
DiBartolo,G., Martinez,M., Lapidus,A., Lucas,S., Copeland,A.,
Richardson,P., Wilson,D.B. and Kyrpides,N.
TITLE Genome sequence and analysis of the soil cellulolytic actinomycete
Thermobifida fusca YX
JOURNAL J Bacteriol 189 (6), 2477-2486 (2007)
PUBMED 17209016
REFERENCE 2 (bases 1 to 3642249)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Di Bartolo,G.,
Chain,P., Schmutz,J., Larimer,F., Land,M., Lykidis,A. and
Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Thermobifida fusca YX
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 3642249)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Di Bartolo,G.,
Chain,P., Schmutz,J., Larimer,F., Land,M., Lykidis,A. and
Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (25-JUL-2005) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA and bacteria available from David Wilson
(dbw3@cornell.edu)
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-PGF
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Thermobifida fusca YX"
/mol_type="genomic DNA"
/strain="YX"
/db_xref="taxon:269800"
protein /locus_tag="Tfu_2467"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
/db_xref="InterPro:IPR001220"
/db_xref="InterPro:IPR001395"
/db_xref="InterPro:IPR002155"
BEGIN
1 MTPSAADRDE TIVRRLTLLA GCLLLSALAF SLDPTRIVGD TKLDLTINPL GFLYRALYLW
61 DPAYFGQLQN QAYGYLFPNG PFHAVLISAG MPEWVVQRLW MAALLCAAFT GTVAVARALR
121 IGSLPTQVLA GVAFALSPRV LTLLSYNSAE LQPTLLLPWV LLPLIHGTRP GADPRRAALL
181 SAAAFLLCGG TNAASELAVL TVPLLYLATR ARQRRTWTLL GWWLAAIGLA SFWWLVPLLI
241 MGGYVFSFMP FTENAATTTS VTSLLNTVRG ASHWLGYIFG PSALPAGSEI ATKPWLVLTT
301 TLVAGLGLAG AVHRNNPERL FLGASALAGI TLITAGYTGD LGGLFGPTVQ HLLDGVLSPF
361 RNIHKFDVLI RLPVVLGLAH LPVAVAHRLP ARGPLQRPEA PQRLAAGACA LTVLATLTPF
421 ATVGGATRGS FTEIPGYWYE ATAWLDAHSG GRMTMAVPGS ARGEYLWGRP MDEPMQPLMD
481 TPWTNQQIIP WGSAGVSRLT HAVDQRLSTG QGSAGLAQVL ARMGVRYLLV RNDLQREGNN
541 GGWPARVHQA LADSPGIEHV RSFGPVIGSL DALPAAHWYD QPYRALDIYE VTDSAPLAST
601 VPADTALRVI GGPETLLAMA DTGLLTDDRP VIVGDDPGAE QIAAADTVVS DTLRRVEVVY
661 PDVRRNTSAA LTATEEFDRD MPAPDVVDPA WEPYTAVIRY EGIAAVTASS AESRASAFPS
721 RRDPGRTPYA ALDQSSATSW RSSSIEGAVG EWLEVTFTEP RDVTGTTITF ERLPDTPPPA
781 TVTVTTDHGS AQTDIDPFHL TQELVVPEGK TSRMRIRVDE LAWEPGYRAG TRVGIVSLAI
841 PGLRADRILT VPGVVDADTL LFTGAAGAAP GCFHGSRVWT CHPSLEIQGE DAYRLDRSVT
901 LSAEAAAKDH VITGQVTVVD LERIEKNANR AGGYPKVTAS STSVDHPAAL GRNAFDGDDA
961 TVWYPSPDDN RPSLHIDFGT TVTLSELTVE FPRGDTVTRP IGVVLDTGTT VREGLLDAYG
1021 HFTFAKLRAK ELRIVFDPPA DQPLEIAEIV LPGVAPSRSV PDDTDATTGC GQGPTVTVNG
1081 TPVETRISRG TVRDQLAGRP VEFTSCTTVP LTAGANRITL PPTERYRVDS VIVRDAEQAA
1141 QEDAAPVRAA AVDVEAWGRS ERRVTVDTDV DSYLVVTENF NDGWTARLAD TGTELTPVRV
1201 DGWKQAWLLP AGTSGEIVLS YAPDTLYHAA LAVGAVLVAV LLVMLLLLPR TAAAQRWAAL
1261 PAAGTTRLPL PVVGVIAVLA GIVSSGWAGC AVALAGLFTA SALERRGQRV SPSWVVAGSL
1321 AAAGLCAASG SALAAHLPLH EATAVLAEPL RGWVAQLLCL PALVSIVLAL PSTPRRRPSP
1381 AAAQHAPSRA AARPQPDNAE EAP
//