LOCUS AAZ54441.1 1523 aa PRT BCT 24-JAN-2023
DEFINITION Thermobifida fusca YX hypothetical protein protein.
ACCESSION CP000088-401
PROTEIN_ID AAZ54441.1
SOURCE Thermobifida fusca YX
ORGANISM Thermobifida fusca YX
Bacteria; Actinomycetota; Streptosporangiales; Nocardiopsaceae;
Thermobifida.
REFERENCE 1 (bases 1 to 3642249)
AUTHORS Lykidis,A., Mavromatis,K., Ivanova,N., Anderson,I., Land,M.,
DiBartolo,G., Martinez,M., Lapidus,A., Lucas,S., Copeland,A.,
Richardson,P., Wilson,D.B. and Kyrpides,N.
TITLE Genome sequence and analysis of the soil cellulolytic actinomycete
Thermobifida fusca YX
JOURNAL J Bacteriol 189 (6), 2477-2486 (2007)
PUBMED 17209016
REFERENCE 2 (bases 1 to 3642249)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Di Bartolo,G.,
Chain,P., Schmutz,J., Larimer,F., Land,M., Lykidis,A. and
Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Thermobifida fusca YX
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 3642249)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
Glavina,T., Hammon,N., Israni,S., Pitluck,S., Di Bartolo,G.,
Chain,P., Schmutz,J., Larimer,F., Land,M., Lykidis,A. and
Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (25-JUL-2005) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
Source DNA and bacteria available from David Wilson
(dbw3@cornell.edu)
Whole genome sequencing and draft assembly at JGI-PGF
Finishing done by JGI-PGF
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
FEATURES Qualifiers
source /organism="Thermobifida fusca YX"
/mol_type="genomic DNA"
/strain="YX"
/db_xref="taxon:269800"
protein /locus_tag="Tfu_0403"
/inference="non-experimental evidence, no additional
details recorded"
/transl_table=11
BEGIN
1 MTSRRSHETP QGPDPRSPGA APAYREAPPA LTGRELADAV YLAAWQQHTA QHPPARPSGG
61 KDTALYAPSR VRGALLARPS QQRHDPKRRR HRVRGALLAR PSGGKDTAPA AGPQRPGTDP
121 SAAVLGAAEK TAGTEPPRLP PAPAPPSGAL RPHPSPLLHR SALYQALRPF RLAATDPWQH
181 SYDAEETARG YARRLLASPH PGGGHRPVAV TPQWAPFVRP GVQLTVLVDE SVSMLFHQDQ
241 VNDFIGLVRS SGVFRGVRVE RFTSDSADPA PVPAAGWGAS SGKDPGGIHI AVVLSDGIGE
301 GWARGSVQSW LGCLAQRLPV AIIHLLDPRQ WSRTGIRPAA MELTVAAHLG RAPANRHYTA
361 RPFQWPDGLP LPEPEFPHSA LSVVLPVLAS RPEMIHAWAR FVMGTRQRTL NAGALRVVPG
421 DTAANAAGER PTAAPTPEAR VRRFRRDSSE TAFQIAVDLA AVPLTEPVIA AVCQRFAGHP
481 QPSELIEVLF SGLVTEVDSP VVTPERRIRW EYRRGVREAL LSLGGRRSRI RRTLADIAAE
541 FAGYDPWFAL LRRILDDSPV GELPELDETS LRLAADTLPA LESIGLADLH HGLVYRIKEQ
601 MLAHQGAGHP DDWSDTLLEI APTGPLVPGS SGQHGTTASE RVPHAPHPTE TPSNSASDES
661 SMMSQRSVSI SDNFPGGSGS TGIGAGRNTS LSAIWGGDIP PRNALFTGRD DLILRLREQL
721 RSSSEEGRMT PSVLKGMPGI GKTQLATEYL YRFRDEYDLV WWVRGGQTHQ IHEAYTLLAQ
781 ELDVFRDNTS INSTIHSVRE ALRRGKPRSR WLLIFDDVRQ PDDIMRYLPI AGPGHVIITT
841 RNLTWPEGGY FKTLPVEVFS LQESVALLSK CGLVGFSKHE AAELAEELGH MPIALRQAAA
901 WMNDSATTIA EYLEFYRDKQ AQLAPMFAPA DPDYPETVIT ALNVSLDRLA VTNPAALQLL
961 QVCSFFSTAP IPRSLFRHAQ DVAAPPELEA ALQEPNKLHR AFSDIGRYGL AVLNHRTRTV
1021 QVHRLVQQAL RVPLTADDQE QRRHCAHLLL AKNDPQDTSS PGARIRYAQL LPHVWATEAW
1081 DCTDSWVRRL VLQEIYVTDL RGEHSDSKQL AEATLSVWRE KLGKTAPETL RAELYLVRAL
1141 RNLGERKRAY ELCERVLRIL TEQHGPDSEE ALEASLEFVR DLRYAGRFHD SVELARDTRD
1201 RYRRILGPDD PETISASHVY AYALLLAGDH RRAADLFWEI YQTNEMILGP NNPSTLAAVD
1261 GYAGSLMEAG DYFKALRYQE DNTERIYSLF GINHRGTLEN MAALAAVLRR TGNLERAVKI
1321 SGEVWRETKD RFGEDSMIAV VAAANHAAAL RSVNRYHEAL DLVEKAYRRC AELLGEDHPH
1381 VAAINVNRAV VLRQMGRTEE ARVIDERALQ VLTDRLGEYH TSTLSSALNL ASDFFGLDDV
1441 AESVRRDTET LARCRRALSE RHPLTLLARR NLVLGRKAMN EDVAEEIAAV ERLYAEVMGD
1501 QHPATLSMRR RERGNADLHL NNL
//