LOCUS       AAZ21887.1               863 aa    PRT              BCT 31-JAN-2014
DEFINITION  Candidatus Pelagibacter ubique HTCC1062 DNA topoisomerase
            I protein.
ACCESSION   CP000084-1063
PROTEIN_ID  AAZ21887.1
SOURCE      Candidatus Pelagibacter ubique HTCC1062
  ORGANISM  Candidatus Pelagibacter ubique HTCC1062
            Bacteria; Pseudomonadota; Alphaproteobacteria; Candidatus
            Pelagibacterales; Candidatus Pelagibacteraceae; Pelagibacter.
REFERENCE   1  (bases 1 to 1308759)
  AUTHORS   Giovannoni,S.J., Tripp,H.J., Givan,S., Podar,M., Vergin,K.L.,
            Baptista,D., Bibbs,L., Eads,J., Richardson,T.H., Noordewier,M.,
            Rappe,M.S., Short,J.M., Carrington,J.C. and Mathur,E.J.
  TITLE     Genome streamlining in a cosmopolitan oceanic bacterium
  JOURNAL   Science 309 (5738), 1242-1245 (2005)
   PUBMED   16109880
REFERENCE   2  (bases 1 to 1308759)
  AUTHORS   Giovannoni,S.J., Bibbs,L., Cho,J.C., Stapels,M.D., Desiderio,R.,
            Vergin,K.L., Rappe,M.S., Laney,S., Wilhelm,L.J., Tripp,H.J.,
            Mathur,E.J. and Barofsky,D.F.
  TITLE     Proteorhodopsin in the ubiquitous marine bacterium SAR11
  JOURNAL   Nature 438 (7064), 82-85 (2005)
   PUBMED   16267553
REFERENCE   3  (bases 1 to 1308759)
  AUTHORS   Giovannoni,S.J., Tripp,H.J., Givan,S.A., Podar,M., Vergin,K.L.,
            Baptista,D., Bibbs,L., Eads,J., Richardson,T.H., Noordweir,M.,
            Rappe,M.S., Short,J., Carrington,J.C. and Mathur,E.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2005) Microbiology, Oregon State University,
            Corvallis, OR 97331, USA
FEATURES             Qualifiers
     source          /organism="Candidatus Pelagibacter ubique HTCC1062"
                     /mol_type="genomic DNA"
                     /strain="HTCC1062"
                     /type_material="reference material of Candidatus
                     Pelagibacter ubique"
                     /db_xref="taxon:335992"
     protein         /gene="topA"
                     /locus_tag="SAR11_1083"
                     /EC_number="5.99.1.2"
                     /transl_table=11
BEGIN
        1 MNLVVVESPA KAKTINKYLG DDYIVLASYG HIRDLPSKNG SVDPENNFKM EWEVDSFSKK
       61 YLKEITDAAK ISSKIILATD PDREGEAIAW HVKEYLNEKK LIKDKHIERV VFNEITKKAV
      121 IHGIENPRQI EPLLVDAYMA RRALDYLVGF NISPILWTKL PGSKSAGRVQ SVALKLITER
      181 EHEIELFDPE EFWTLSIQFN DSNKNSILAS ITQLNDKKIE KFSFKNKAEI DKAMKEVKSK
      241 NFNINDISSK VVNRNPSGPF TTSTLQQVSS GRLGFGASRT MQIAQKLYQG IEIDGETIGL
      301 ITYMRTDGTN LSTDAIDTFR KYIKNEFGDE YVPDNAASYS GKKAKNAQEA HEAIRPTDIM
      361 RAPDTVKKYL SPDQHKLYDL IWSRALSSQM KPAQFDRNTI TITSDDNGTI CKASGSVIKF
      421 DGFLKVMKDT KKDDDEDILP EMNKGPVNIE SLLDEQHFTQ PPPRYSEASL VKKLEELGIG
      481 RPSTYASIIS VISTRGYAET INKRFHPTDR GKLISAFLEK LFSKYVDYNF TASLENQLDD
      541 ITTGKEGWIK VLELFWKDFN QNVSDVKEKR TREVLDLLND SLGSLIFERD TEGNINRQCK
      601 LCNGGSLSLK NSFRGGAFIG CSNYPDCKFT RPLSKAKAAA QSQLAEPKFI GKHENGNDMY
      661 LKNGRFGPYL QYEKIEEIKD EIIIETKKKK KTKKKKIEKE DNNLRNVSIP KGITLDSVDL
      721 DRAKFLCSLP KSLGINPENQ RDIILNSGRF GPYLKCENKS ARIENVEEIF SIGLNRAITL
      781 IAEAKPGRMS ASIIKDLGEH PEDKKPVRVM KGQYGPYIKY KSLNATIPEE KDPLELNMEE
      841 ALILIEKRKE YDKNKKVKKK KKK
//