LOCUS AH002839 3479 bp DNA linear HUM 28-JUL-2016 DEFINITION Homo sapiens chromosome 2 immunoglobulin kappa chain variable region (IGKV) gene, complete sequence; and immunoglobulin kappa chain constant region (IGKC) gene, partial cds. ACCESSION AH002839 J00241 J00242 J00243 K01325 V00556 VERSION AH002839.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1229 to 1329; 2271 to 3479) AUTHORS Hieter,P.A., Max,E.E., Seidman,J.G., Maizel,J.V. Jr. and Leder,P. TITLE Cloned human and mouse kappa immunoglobulin constant and J region genes conserve homology in functional segments JOURNAL Cell 22 (1 Pt 1), 197-207 (1980) PUBMED 6775818 REFERENCE 2 (bases 1 to 3479) AUTHORS Hieter,P.A., Maizel,J.V. Jr. and Leder,P. TITLE Evolution of human immunoglobulin kappa J region genes JOURNAL J. Biol. Chem. 257 (3), 1516-1522 (1982) PUBMED 6276389 REFERENCE 3 (bases 1972 to 2170) AUTHORS Emorine,L., Kuehl,M., Weir,L., Leder,P. and Max,E.E. TITLE A conserved sequence in the immunoglobulin J kappa-C kappa intron: possible enhancer element JOURNAL Nature 304 (5925), 447-449 (1983) PUBMED 6308460 COMMENT On or before Apr 6, 2016 this sequence version replaced J00242.1, K01325.1, J00241.1, AH002839.1. FEATURES Location/Qualifiers source 1..3479 /organism="Homo sapiens" /mol_type="genomic DNA" /db_xref="taxon:9606" /chromosome="2" /map="2p12" /tissue_type="placenta" /germline regulatory 213..250 /regulatory_class="other" /note="recombination recognition sequence; putative" gene 252..1612 /gene="IGKV" /note="immunoglobulin kappa chain variable region" J_segment 252..288 /gene="IGKV" /note="VK-1 J1" regulatory 574..611 /regulatory_class="other" /gene="IGKV" /note="recombination recognition sequence; putative" J_segment 614..650 /gene="IGKV" /note="VK-1 J2" regulatory 881..917 /regulatory_class="other" /gene="IGKV" /note="recombination recognition sequence; putative" J_segment 919..955 /gene="IGKV" /note="VK-1 J3" regulatory 1222..1259 /regulatory_class="other" /gene="IGKV" /note="recombination recognition sequence; putative" J_segment 1261..1297 /gene="IGKV" /note="VK-1 J4" regulatory 1536..1573 /regulatory_class="other" /gene="IGKV" /note="recombination recognition sequence; putative" J_segment 1576..1612 /gene="IGKV" /note="VK-1 J5" gap 1872..1971 /estimated_length=unknown gene <1972..3103 /gene="IGKC" intron <1972..>2170 /gene="IGKC" /note="intron J-C; G00-120-088" regulatory 1996..2120 /regulatory_class="other" /gene="IGKC" /note="enhancer element; G00-120-088; putative" gap 2171..2270 /estimated_length=unknown mRNA <2604..3103 /gene="IGKC" /product="immunoglobulin kappa chain constant region" CDS <2604..2926 /gene="IGKC" /note="C region" /codon_start=3 /product="immunoglobulin kappa chain constant region" /protein_id="AAA58989.1" /db_xref="GDB:G00-120-088" /translation="TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDN ALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFN RGEC" polyA_site 3103 /gene="IGKC" BASE COUNT 939 a 696 c 731 g 913 t ORIGIN 1 ataaatcaat aagcagtcca gatgtggcaa gttgtaagaa ggaaccatca aggccataga 61 cgtaaatata ttctcttctt ggattttagg tctcacctaa agaaaataaa cacatgctat 121 gtcagagaag cctcagggtt tccacacctg ctcgaaaagg gagttgagct tcagcagctg 181 acccaggact ctgttcccct ttggtgagaa gggtttctgt tcagcaagac aatggagagc 241 tctcactgtg gtggacgttc ggccaaggga ccaaggtgga aatcaaacgt gagtagaatt 301 taaactttgc ttcctcagtt gtctgtgtct tctgttccct gtgtctatga agttgatcta 361 taaggtgact ctgcaatcag cctctgacat ccttcaggga aaagataaag ataagtctgt 421 agtcaaactc gagaattgat tgcacatttt ctttgaagag caagcaagat tcagtcattg 481 ggtgagaata acttgtctaa gtaatagctt cagaaatgtc ctagggaaca taacatgttc 541 tggacagagc cttggtcaat tgtcagaaag ggagtttttg tataggaggg aagttaagag 601 gaaccattgt gtgtacactt ttggccaggg gaccaagctg gagatcaaac gtaagtactt 661 ttttccactg attcttcact gttgctaatt agtttacttt gtgttccttt gtgtggattt 721 tcattagtcg gatgccaggg actctaacaa acttcattcc caggttaggt acagaggagg 781 ggaaattgtt ccacaggacg ctagcttgtg gctaattttt aagatttcta aatcaaaata 841 acttcattgg gggaaagagg cttgctgagc tttcagggag gtttttgtaa agggaaaagt 901 taagacgaat cactgtgatt cactttcggc cctgggacca aagtggatat caaacgtaag 961 tacatctgtc tcaattattc gtgagatttt agtgccattg tatcatttgt gcaagttttg 1021 tgcatatttt ggttgaataa acctggtcac ccagaagtaa atagcaggac accagaaaaa 1081 tcgaaactta aaaaagctga gcaagtagaa cgacttcttt gggtttgaga ggagaataga 1141 ttccttgggg gaaatgggga agaaatagct agatttttct ctgaacaagc agcctatctc 1201 atatgattgg cttcaagaga ggtttttgtt gaggggaaag ggtgagatcc ctcactgtgg 1261 ctcactttcg gcggagggac caaggtggag atcaaacgta agtgcacttt cctaatgctt 1321 tttcttataa gtttaaattt gagcgttttt gtgtttgaga tattagctca ggtcaattcc 1381 aaagagtacc agattctttc aaaaagtcag atgagtaagg gacagaaaat tagttcatct 1441 taaggaacag ccaagcgcta gccagttaag tgaggcatct caattgcaag attttctctg 1501 catcggtcag gctagtgata ttaacagcga aaagagattt ttgttaaggg gaaagtaatt 1561 aagttaacac tgtggatcac cttcggccaa gggacacgac tggagattaa acgtaagcat 1621 ttttcaccat tgtccgaaat ttcggtccga tggccagtat tgacctttag aggctcaaat 1681 aggagtttgg taaagattgg taaatgaggg catttaagat ttgccatggg ttgcaaaagt 1741 taaactcagc ttcaaaaatg gatttggaga aaaaaagatt aaattgctct gaaactgaat 1801 gacacaaagt aaaaaaaaag tgcactaaaa aggaaccctt gcatttcgga aggaccaaga 1861 gtaaatttat tnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1921 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn ncttatttta 1981 cattttaacc tactgctctc ccacccaacg ggtggaatcc cccagagggg gatttccaag 2041 aggccacctg gcagttgctg agggtcagaa gtgaagctag ccacttcctc ttaggcaggt 2101 ggccaagatt acagttgacc tctcctggta tggctgaaaa ttgctgcata tggttacagg 2161 ccttgaggct nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2221 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn ttctaaactc 2281 tgagggggtc ggatgacgtg gccattcttt gcctaaagca ttgagtttac tgcaaggtca 2341 gaaaagcatg caaagccctc agaatggctg caaagagctc caacaaaaca atttagaact 2401 ttattaagga atagggggaa gctaggaaga aactcaaaac atcaagattt taaatacgct 2461 tcttggtctc cttgctataa ttatctggga taagcatgct gttttctgtc tgtccctaac 2521 atgccctgtg attatccgca aacaacacac ccaagggcag aactttgtta cttaaacacc 2581 atcctgtttg cttctttcct caggaactgt ggctgcacca tctgtcttca tcttcccgcc 2641 atctgatgag cagttgaaat ctggaactgc ctctgttgtg tgcctgctga ataacttcta 2701 tcccagagag gccaaagtac agtggaaggt ggataacgcc ctccaatcgg gtaactccca 2761 ggagagtgtc acagagcagg acagcaagga cagcacctac agcctcagca gcaccctgac 2821 gctgagcaaa gcagactacg agaaacacaa agtctacgcc tgcgaagtca cccatcaggg 2881 cctgagctcg cccgtcacaa agagcttcaa caggggagag tgttagaggg agaagtgccc 2941 ccacctgctc ctcagttcca gcctgacccc ctcccatcct ttggcctctg accctttttc 3001 cacaggggac ctacccctat tgcggtcctc cagctcatct ttcacctcac ccccctcctc 3061 ctccttggct ttaattatgc taatgttgga ggagaatgaa taaataaagt gaatctttgc 3121 acctgtggtt tctctctttc ctcaatttaa taattattat ctgttgttta ccaactactc 3181 aatttctctt ataagggact aaatatgtag tcatcctaag gcgcataacc atttataaaa 3241 atcatccttc attctatttt accctatcat cctctgcaag acagtcctcc ctcaaaccca 3301 caagccttct gtcctcacag tcccctgggc cgtggtagga gagacttgct tccttgtttt 3361 cccctcctca gcaagccctc atagtccttt ttaagggtga caggtcttac ggtcatatat 3421 cctttgattc aattccctgg gaatcaacca aggcaaattt ttcaaaagaa gaaacctgc //